Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.63■□□□□ 0.09
Smarcc1P97496 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.63■□□□□ 0.09
Smarcc1P97496 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Gm24891-201ENSMUST00000104391 136 ntBASIC15.63■□□□□ 0.09
Smarcc1P97496 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Smarcc1P97496 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smarcc1P97496 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
Smarcc1P97496 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smarcc1P97496 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smarcc1P97496 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.63■□□□□ 0.09
Smarcc1P97496 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.63■□□□□ 0.09
Smarcc1P97496 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Smarcc1P97496 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc1P97496 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.63■□□□□ 0.09
Smarcc1P97496 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.62■□□□□ 0.09
Smarcc1P97496 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Gm3332-201ENSMUST00000189337 928 ntBASIC15.62■□□□□ 0.09
Smarcc1P97496 Gm43184-201ENSMUST00000197247 542 ntBASIC15.62■□□□□ 0.09
Smarcc1P97496 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Mir7686-201ENSMUST00000200604 57 ntBASIC15.62■□□□□ 0.09
Smarcc1P97496 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.62■□□□□ 0.09
Smarcc1P97496 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Gm9132-201ENSMUST00000210182 832 ntBASIC15.62■□□□□ 0.09
Smarcc1P97496 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.62■□□□□ 0.09
Smarcc1P97496 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Acot6-202ENSMUST00000222921 3622 ntBASIC15.62■□□□□ 0.09
Smarcc1P97496 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc1P97496 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Smarcc1P97496 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.61■□□□□ 0.09
Smarcc1P97496 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Smarcc1P97496 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm15573-201ENSMUST00000119487 540 ntBASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm23085-201ENSMUST00000157849 293 ntBASIC15.61■□□□□ 0.09
Smarcc1P97496 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.61■□□□□ 0.09
Smarcc1P97496 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm10774-201ENSMUST00000188689 204 ntBASIC15.61■□□□□ 0.09
Smarcc1P97496 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm44958-201ENSMUST00000203734 736 ntBASIC15.61■□□□□ 0.09
Smarcc1P97496 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.61■□□□□ 0.09
Smarcc1P97496 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.61■□□□□ 0.09
Smarcc1P97496 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.61■□□□□ 0.09
Smarcc1P97496 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smarcc1P97496 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.61■□□□□ 0.09
Smarcc1P97496 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.61■□□□□ 0.09
Smarcc1P97496 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc1P97496 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms