Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Gm24136-201ENSMUST00000083374 165 ntBASIC12.96□□□□□ -0.33
Vps45P97390 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.96□□□□□ -0.33
Vps45P97390 Gm26110-201ENSMUST00000083971 165 ntBASIC12.96□□□□□ -0.33
Vps45P97390 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps45P97390 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps45P97390 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps45P97390 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps45P97390 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps45P97390 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Vps45P97390 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Vps45P97390 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps45P97390 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Vps45P97390 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.95□□□□□ -0.34
Vps45P97390 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Gm10434-201ENSMUST00000101158 471 ntBASIC12.95□□□□□ -0.34
Vps45P97390 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.95□□□□□ -0.34
Vps45P97390 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 Gm14263-201ENSMUST00000117955 746 ntBASIC12.95□□□□□ -0.34
Vps45P97390 Gm15703-201ENSMUST00000120250 880 ntBASIC12.95□□□□□ -0.34
Vps45P97390 Gm14726-201ENSMUST00000120623 896 ntBASIC12.95□□□□□ -0.34
Vps45P97390 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.95□□□□□ -0.34
Vps45P97390 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.95□□□□□ -0.34
Vps45P97390 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.95□□□□□ -0.34
Vps45P97390 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Vps45P97390 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.95□□□□□ -0.34
Vps45P97390 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.95□□□□□ -0.34
Vps45P97390 Gm19208-201ENSMUST00000213861 912 ntBASIC12.95□□□□□ -0.34
Vps45P97390 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.95□□□□□ -0.34
Vps45P97390 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.95□□□□□ -0.34
Vps45P97390 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Vps45P97390 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.95□□□□□ -0.34
Vps45P97390 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps45P97390 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps45P97390 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Vps45P97390 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vps45P97390 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.94□□□□□ -0.34
Vps45P97390 Gm24548-201ENSMUST00000158650 108 ntBASIC12.94□□□□□ -0.34
Vps45P97390 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps45P97390 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps45P97390 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Vps45P97390 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vps45P97390 Gm18584-201ENSMUST00000203098 964 ntBASIC12.94□□□□□ -0.34
Vps45P97390 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.94□□□□□ -0.34
Vps45P97390 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Gm26035-201ENSMUST00000083065 308 ntBASIC12.94□□□□□ -0.34
Vps45P97390 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps45P97390 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Vps45P97390 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps45P97390 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps45P97390 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps45P97390 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps45P97390 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps45P97390 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps45P97390 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms