Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.55□□□□□ -0.24
CiitaP79621 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.55□□□□□ -0.24
CiitaP79621 Gm14017-201ENSMUST00000121934 386 ntBASIC13.55□□□□□ -0.24
CiitaP79621 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.55□□□□□ -0.24
CiitaP79621 Rprl1-202ENSMUST00000198476 238 ntBASIC13.55□□□□□ -0.24
CiitaP79621 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.55□□□□□ -0.24
CiitaP79621 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.55□□□□□ -0.24
CiitaP79621 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CiitaP79621 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.55□□□□□ -0.24
CiitaP79621 Gzmn-202ENSMUST00000225535 989 ntBASIC13.55□□□□□ -0.24
CiitaP79621 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CiitaP79621 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.55□□□□□ -0.24
CiitaP79621 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CiitaP79621 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CiitaP79621 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.54□□□□□ -0.24
CiitaP79621 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.54□□□□□ -0.24
CiitaP79621 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CiitaP79621 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.54□□□□□ -0.24
CiitaP79621 Gm14130-201ENSMUST00000118417 987 ntBASIC13.54□□□□□ -0.24
CiitaP79621 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Gm26361-201ENSMUST00000158868 186 ntBASIC13.54□□□□□ -0.24
CiitaP79621 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.54□□□□□ -0.24
CiitaP79621 Gm19187-201ENSMUST00000206781 892 ntBASIC13.54□□□□□ -0.24
CiitaP79621 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.54□□□□□ -0.24
CiitaP79621 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Mir433-201ENSMUST00000093564 124 ntBASIC13.54□□□□□ -0.24
CiitaP79621 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.54□□□□□ -0.24
CiitaP79621 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CiitaP79621 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.54□□□□□ -0.24
CiitaP79621 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CiitaP79621 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CiitaP79621 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CiitaP79621 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CiitaP79621 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CiitaP79621 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
CiitaP79621 Gm13996-201ENSMUST00000118456 430 ntBASIC13.53□□□□□ -0.24
CiitaP79621 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.53□□□□□ -0.24
CiitaP79621 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.53□□□□□ -0.24
CiitaP79621 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.53□□□□□ -0.24
CiitaP79621 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Gm45224-201ENSMUST00000208203 414 ntBASIC13.53□□□□□ -0.24
CiitaP79621 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.53□□□□□ -0.24
CiitaP79621 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.53□□□□□ -0.24
CiitaP79621 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CiitaP79621 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CiitaP79621 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CiitaP79621 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.53□□□□□ -0.24
CiitaP79621 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.53□□□□□ -0.24
CiitaP79621 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms