Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 Gm11560-201ENSMUST00000117567 948 ntBASIC20.06■□□□□ 0.8
Cux2P70298 Gm14213-201ENSMUST00000119778 768 ntBASIC20.06■□□□□ 0.8
Cux2P70298 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC20.06■□□□□ 0.8
Cux2P70298 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC20.06■□□□□ 0.8
Cux2P70298 Gm25998-201ENSMUST00000175397 53 ntBASIC20.06■□□□□ 0.8
Cux2P70298 Gm43275-201ENSMUST00000202053 1020 ntBASIC20.06■□□□□ 0.8
Cux2P70298 Gm6108-201ENSMUST00000208365 367 ntBASIC20.06■□□□□ 0.8
Cux2P70298 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC20.06■□□□□ 0.8
Cux2P70298 Gm26035-201ENSMUST00000083065 308 ntBASIC20.06■□□□□ 0.8
Cux2P70298 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cux2P70298 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cux2P70298 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cux2P70298 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cux2P70298 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC20.06■□□□□ 0.8
Cux2P70298 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cux2P70298 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cux2P70298 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cux2P70298 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cux2P70298 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cux2P70298 Gm45135-201ENSMUST00000206787 1184 ntBASIC20.05■□□□□ 0.8
Cux2P70298 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC20.05■□□□□ 0.8
Cux2P70298 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC20.05■□□□□ 0.8
Cux2P70298 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cux2P70298 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cux2P70298 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cux2P70298 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cux2P70298 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cux2P70298 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cux2P70298 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cux2P70298 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC20.05■□□□□ 0.8
Cux2P70298 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cux2P70298 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Gm6630-201ENSMUST00000119199 454 ntBASIC20.04■□□□□ 0.8
Cux2P70298 Gm5909-201ENSMUST00000119768 1281 ntBASIC20.04■□□□□ 0.8
Cux2P70298 Gm5700-201ENSMUST00000191483 989 ntBASIC20.04■□□□□ 0.8
Cux2P70298 Gm8574-201ENSMUST00000203207 924 ntBASIC20.04■□□□□ 0.8
Cux2P70298 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC20.04■□□□□ 0.8
Cux2P70298 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cux2P70298 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC20.04■□□□□ 0.8
Cux2P70298 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cux2P70298 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Cux2P70298 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cux2P70298 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cux2P70298 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Gm17214-201ENSMUST00000164501 541 ntBASIC20.03■□□□□ 0.8
Cux2P70298 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cux2P70298 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cux2P70298 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
Cux2P70298 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Gm7082-201ENSMUST00000209880 969 ntBASIC20.03■□□□□ 0.8
Cux2P70298 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC20.03■□□□□ 0.8
Cux2P70298 AC130477.1-201ENSMUST00000226982 420 ntBASIC20.03■□□□□ 0.8
Cux2P70298 Gm23105-201ENSMUST00000083719 134 ntBASIC20.03■□□□□ 0.8
Cux2P70298 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Cux2P70298 Gm18227-201ENSMUST00000211082 1468 ntBASIC20.03■□□□□ 0.8
Cux2P70298 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cux2P70298 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux2P70298 Gm5555-201ENSMUST00000120352 1111 ntBASIC20.02■□□□□ 0.8
Cux2P70298 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC20.02■□□□□ 0.8
Cux2P70298 Gm9916-201ENSMUST00000192943 1228 ntBASIC20.02■□□□□ 0.8
Cux2P70298 Gm30671-201ENSMUST00000214898 318 ntBASIC20.02■□□□□ 0.8
Cux2P70298 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC20.02■□□□□ 0.8
Cux2P70298 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Gm10728-201ENSMUST00000194292 1829 ntBASIC20.02■□□□□ 0.8
Cux2P70298 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cux2P70298 Gm38058-201ENSMUST00000194323 4368 ntBASIC20.02■□□□□ 0.8
Cux2P70298 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms