Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm37424-201ENSMUST00000191727 561 ntBASIC10.46□□□□□ -0.73
Pdlim4P70271 Gm18584-201ENSMUST00000203098 964 ntBASIC10.46□□□□□ -0.73
Pdlim4P70271 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.46□□□□□ -0.73
Pdlim4P70271 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdlim4P70271 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdlim4P70271 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdlim4P70271 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Pdlim4P70271 Snora73a-201ENSMUST00000082453 205 ntBASIC10.46□□□□□ -0.73
Pdlim4P70271 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.46□□□□□ -0.73
Pdlim4P70271 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Pdlim4P70271 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Pdlim4P70271 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdlim4P70271 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.46□□□□□ -0.73
Pdlim4P70271 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdlim4P70271 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.46□□□□□ -0.74
Pdlim4P70271 Cog3-203ENSMUST00000227473 4197 ntBASIC10.46□□□□□ -0.74
Pdlim4P70271 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.46□□□□□ -0.74
Pdlim4P70271 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Pdlim4P70271 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdlim4P70271 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.45□□□□□ -0.74
Pdlim4P70271 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Pdlim4P70271 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.45□□□□□ -0.74
Pdlim4P70271 Gm5904-201ENSMUST00000210286 865 ntBASIC10.45□□□□□ -0.74
Pdlim4P70271 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pdlim4P70271 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim4P70271 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim4P70271 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Snord83b-201ENSMUST00000104546 94 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm5187-201ENSMUST00000117317 991 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm11591-201ENSMUST00000120063 702 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm12502-201ENSMUST00000120197 444 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm27572-201ENSMUST00000183702 255 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm19184-201ENSMUST00000196798 928 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm45880-201ENSMUST00000213041 853 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm32025-201ENSMUST00000217960 307 ntBASIC10.44□□□□□ -0.74
Pdlim4P70271 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms