Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Gm12490-201ENSMUST00000120255 560 ntBASIC13.8□□□□□ -0.2
Hmgb1P63158 Gm12363-201ENSMUST00000122250 668 ntBASIC13.8□□□□□ -0.2
Hmgb1P63158 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.8□□□□□ -0.2
Hmgb1P63158 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgb1P63158 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.8□□□□□ -0.2
Hmgb1P63158 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.8□□□□□ -0.2
Hmgb1P63158 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.8□□□□□ -0.2
Hmgb1P63158 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.8□□□□□ -0.2
Hmgb1P63158 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgb1P63158 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.8□□□□□ -0.2
Hmgb1P63158 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hmgb1P63158 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hmgb1P63158 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.79□□□□□ -0.2
Hmgb1P63158 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.79□□□□□ -0.2
Hmgb1P63158 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Gm24231-201ENSMUST00000104315 133 ntBASIC13.79□□□□□ -0.2
Hmgb1P63158 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.79□□□□□ -0.2
Hmgb1P63158 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.79□□□□□ -0.2
Hmgb1P63158 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.79□□□□□ -0.2
Hmgb1P63158 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Gm26927-201ENSMUST00000182385 965 ntBASIC13.79□□□□□ -0.2
Hmgb1P63158 Gm27390-201ENSMUST00000184516 176 ntBASIC13.79□□□□□ -0.2
Hmgb1P63158 Gm29649-201ENSMUST00000185649 419 ntBASIC13.79□□□□□ -0.2
Hmgb1P63158 Gm38092-201ENSMUST00000195600 653 ntBASIC13.79□□□□□ -0.2
Hmgb1P63158 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hmgb1P63158 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hmgb1P63158 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.79□□□□□ -0.2
Hmgb1P63158 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hmgb1P63158 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Hmgb1P63158 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgb1P63158 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hmgb1P63158 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Hmgb1P63158 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Hmgb1P63158 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.78□□□□□ -0.2
Hmgb1P63158 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.78□□□□□ -0.2
Hmgb1P63158 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.78□□□□□ -0.2
Hmgb1P63158 Gm7561-201ENSMUST00000211203 886 ntBASIC13.78□□□□□ -0.2
Hmgb1P63158 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.78□□□□□ -0.2
Hmgb1P63158 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgb1P63158 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms