Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ybx1P62960 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ybx1P62960 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ybx1P62960 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.81□□□□□ -0.36
Ybx1P62960 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ybx1P62960 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.81□□□□□ -0.36
Ybx1P62960 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Gm18734-201ENSMUST00000172937 808 ntBASIC12.81□□□□□ -0.36
Ybx1P62960 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.81□□□□□ -0.36
Ybx1P62960 Gm19187-201ENSMUST00000206781 892 ntBASIC12.81□□□□□ -0.36
Ybx1P62960 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.81□□□□□ -0.36
Ybx1P62960 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.81□□□□□ -0.36
Ybx1P62960 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Ybx1P62960 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ybx1P62960 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Ybx1P62960 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ybx1P62960 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Gm15711-201ENSMUST00000118889 535 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.8□□□□□ -0.36
Ybx1P62960 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Gm29615-201ENSMUST00000185371 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm28224-201ENSMUST00000186078 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm29001-201ENSMUST00000186177 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm28292-201ENSMUST00000186593 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm28101-201ENSMUST00000187608 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm29076-201ENSMUST00000187689 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm28302-201ENSMUST00000187931 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm28646-201ENSMUST00000188220 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm28205-201ENSMUST00000189177 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm29032-201ENSMUST00000189797 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm28695-201ENSMUST00000190300 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm37448-201ENSMUST00000192795 697 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.8□□□□□ -0.36
Ybx1P62960 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ybx1P62960 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.8□□□□□ -0.36
Ybx1P62960 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ybx1P62960 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ybx1P62960 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ybx1P62960 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.79□□□□□ -0.36
Ybx1P62960 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ybx1P62960 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ybx1P62960 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.79□□□□□ -0.36
Ybx1P62960 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ybx1P62960 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ybx1P62960 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ybx1P62960 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ybx1P62960 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ybx1P62960 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ybx1P62960 Gm23949-201ENSMUST00000104027 127 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms