Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.4□□□□□ -0.74
Lsm5P62322 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.4□□□□□ -0.74
Lsm5P62322 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.4□□□□□ -0.74
Lsm5P62322 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.4□□□□□ -0.74
Lsm5P62322 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.4□□□□□ -0.74
Lsm5P62322 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Gm43094-201ENSMUST00000196549 921 ntBASIC10.4□□□□□ -0.74
Lsm5P62322 Gm42550-201ENSMUST00000201553 960 ntBASIC10.4□□□□□ -0.74
Lsm5P62322 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Lsm5P62322 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm5P62322 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm5P62322 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Lsm5P62322 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm5P62322 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm5P62322 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm5P62322 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.4□□□□□ -0.75
Lsm5P62322 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.4□□□□□ -0.75
Lsm5P62322 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.4□□□□□ -0.75
Lsm5P62322 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm5P62322 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Lsm5P62322 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Lsm5P62322 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm5P62322 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.39□□□□□ -0.75
Lsm5P62322 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.39□□□□□ -0.75
Lsm5P62322 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.39□□□□□ -0.75
Lsm5P62322 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Lsm5P62322 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Lsm5P62322 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.39□□□□□ -0.75
Lsm5P62322 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.39□□□□□ -0.75
Lsm5P62322 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.39□□□□□ -0.75
Lsm5P62322 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.39□□□□□ -0.75
Lsm5P62322 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.39□□□□□ -0.75
Lsm5P62322 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.39□□□□□ -0.75
Lsm5P62322 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.39□□□□□ -0.75
Lsm5P62322 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Lsm5P62322 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Lsm5P62322 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Lsm5P62322 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
Lsm5P62322 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Lsm5P62322 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm5P62322 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lsm5P62322 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Lsm5P62322 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.38□□□□□ -0.75
Lsm5P62322 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Lsm5P62322 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Lsm5P62322 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Lsm5P62322 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Mir449b-201ENSMUST00000104833 80 ntBASIC10.38□□□□□ -0.75
Lsm5P62322 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm5P62322 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms