Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Lsm3P62311 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.37□□□□□ -0.59
Lsm3P62311 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm3P62311 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lsm3P62311 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.36□□□□□ -0.59
Lsm3P62311 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.36□□□□□ -0.59
Lsm3P62311 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lsm3P62311 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.36□□□□□ -0.59
Lsm3P62311 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Lsm3P62311 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Gm25287-201ENSMUST00000103846 110 ntBASIC11.36□□□□□ -0.59
Lsm3P62311 Gm22918-201ENSMUST00000103855 110 ntBASIC11.36□□□□□ -0.59
Lsm3P62311 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lsm3P62311 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.36□□□□□ -0.59
Lsm3P62311 Gm13365-201ENSMUST00000121188 973 ntBASIC11.36□□□□□ -0.59
Lsm3P62311 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lsm3P62311 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.36□□□□□ -0.59
Lsm3P62311 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.36□□□□□ -0.59
Lsm3P62311 Gm21362-201ENSMUST00000194272 928 ntBASIC11.36□□□□□ -0.59
Lsm3P62311 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.36□□□□□ -0.59
Lsm3P62311 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lsm3P62311 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.36□□□□□ -0.59
Lsm3P62311 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Lsm3P62311 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.36□□□□□ -0.59
Lsm3P62311 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lsm3P62311 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm3P62311 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Lsm3P62311 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.35□□□□□ -0.59
Lsm3P62311 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Lsm3P62311 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.35□□□□□ -0.59
Lsm3P62311 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.35□□□□□ -0.59
Lsm3P62311 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.35□□□□□ -0.59
Lsm3P62311 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Lsm3P62311 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.35□□□□□ -0.59
Lsm3P62311 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lsm3P62311 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.35□□□□□ -0.59
Lsm3P62311 Gm42599-201ENSMUST00000201308 469 ntBASIC11.35□□□□□ -0.59
Lsm3P62311 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.35□□□□□ -0.59
Lsm3P62311 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lsm3P62311 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.35□□□□□ -0.59
Lsm3P62311 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Lsm3P62311 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Lsm3P62311 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Lsm3P62311 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm3P62311 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lsm3P62311 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms