Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.06□□□□□ -0.64
Sec61a1P61620 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sec61a1P61620 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.06□□□□□ -0.64
Sec61a1P61620 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a1P61620 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm8810-201ENSMUST00000172895 754 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Proscos-202ENSMUST00000178990 666 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm24196-201ENSMUST00000179161 110 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Itm2b-204ENSMUST00000228637 783 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm10012-201ENSMUST00000078252 192 ntBASIC11.05□□□□□ -0.64
Sec61a1P61620 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61a1P61620 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61a1P61620 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sec61a1P61620 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.04□□□□□ -0.64
Sec61a1P61620 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sec61a1P61620 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61a1P61620 Gm5687-201ENSMUST00000118252 640 ntBASIC11.04□□□□□ -0.64
Sec61a1P61620 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Sec61a1P61620 Mir1982-201ENSMUST00000157368 74 ntBASIC11.04□□□□□ -0.64
Sec61a1P61620 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms