Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.83□□□□□ -0.52
Nup43P59235 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.83□□□□□ -0.52
Nup43P59235 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.83□□□□□ -0.52
Nup43P59235 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.83□□□□□ -0.52
Nup43P59235 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nup43P59235 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nup43P59235 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Nup43P59235 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Nup43P59235 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.83□□□□□ -0.52
Nup43P59235 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup43P59235 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.83□□□□□ -0.52
Nup43P59235 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 Gm13875-201ENSMUST00000120162 282 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Gm13342-201ENSMUST00000121055 207 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Gm14760-201ENSMUST00000121831 999 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.82□□□□□ -0.52
Nup43P59235 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Nup43P59235 Gm27023-201ENSMUST00000182372 285 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Gm2546-201ENSMUST00000182630 991 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.82□□□□□ -0.52
Nup43P59235 Gm6007-201ENSMUST00000208170 823 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Morn2-202ENSMUST00000227729 656 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nup43P59235 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nup43P59235 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.82□□□□□ -0.52
Nup43P59235 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nup43P59235 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup43P59235 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.81□□□□□ -0.52
Nup43P59235 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nup43P59235 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.81□□□□□ -0.52
Nup43P59235 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nup43P59235 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.81□□□□□ -0.52
Nup43P59235 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Gm12241-201ENSMUST00000118330 726 ntBASIC11.81□□□□□ -0.52
Nup43P59235 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.81□□□□□ -0.52
Nup43P59235 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Nup43P59235 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup43P59235 Gm9022-201ENSMUST00000182482 992 ntBASIC11.81□□□□□ -0.52
Nup43P59235 Gm27516-201ENSMUST00000184237 98 ntBASIC11.81□□□□□ -0.52
Nup43P59235 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Nup43P59235 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.81□□□□□ -0.52
Nup43P59235 Gm37201-201ENSMUST00000191845 523 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms