Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm10156-201ENSMUST00000122364 462 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdh11P55288 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cdh11P55288 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm27331-201ENSMUST00000183705 60 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm37424-201ENSMUST00000191727 561 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Gm6007-201ENSMUST00000208170 823 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdh11P55288 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdh11P55288 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdh11P55288 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Cdh11P55288 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.43□□□□□ -0.58
Cdh11P55288 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh11P55288 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm12384-201ENSMUST00000119228 919 ntBASIC11.42□□□□□ -0.58
Cdh11P55288 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.42□□□□□ -0.58
Cdh11P55288 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.42□□□□□ -0.58
Cdh11P55288 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Cdh11P55288 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.42□□□□□ -0.58
Cdh11P55288 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm10478-201ENSMUST00000084451 396 ntBASIC11.42□□□□□ -0.58
Cdh11P55288 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh11P55288 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh11P55288 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.41□□□□□ -0.58
Cdh11P55288 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.41□□□□□ -0.58
Cdh11P55288 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh11P55288 Gm27572-201ENSMUST00000183702 255 ntBASIC11.41□□□□□ -0.58
Cdh11P55288 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.41□□□□□ -0.58
Cdh11P55288 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh11P55288 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms