Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sox1P53783 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox1P53783 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Sox1P53783 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox1P53783 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox1P53783 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Sox1P53783 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sox1P53783 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox1P53783 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox1P53783 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sox1P53783 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Sox1P53783 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Gm11509-201ENSMUST00000117358 325 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.76□□□□□ -0.37
Sox1P53783 Gm26368-201ENSMUST00000157826 118 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Gm8723-201ENSMUST00000166076 820 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Gm8701-201ENSMUST00000169259 874 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Gm23045-201ENSMUST00000175041 96 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.76□□□□□ -0.37
Sox1P53783 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.76□□□□□ -0.37
Sox1P53783 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.76□□□□□ -0.37
Sox1P53783 Gm7904-201ENSMUST00000217049 465 ntBASIC12.76□□□□□ -0.37
Sox1P53783 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.76□□□□□ -0.37
Sox1P53783 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.76□□□□□ -0.37
Sox1P53783 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.76□□□□□ -0.37
Sox1P53783 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.76□□□□□ -0.37
Sox1P53783 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox1P53783 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sox1P53783 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox1P53783 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Gm12857-201ENSMUST00000117678 592 ntBASIC12.75□□□□□ -0.37
Sox1P53783 Gm16166-201ENSMUST00000118291 787 ntBASIC12.75□□□□□ -0.37
Sox1P53783 Gm15352-201ENSMUST00000118696 270 ntBASIC12.75□□□□□ -0.37
Sox1P53783 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sox1P53783 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.75□□□□□ -0.37
Sox1P53783 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.75□□□□□ -0.37
Sox1P53783 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.75□□□□□ -0.37
Sox1P53783 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.75□□□□□ -0.37
Sox1P53783 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sox1P53783 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox1P53783 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms