Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx3P50481 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.66□□□□□ -0.38
Lhx3P50481 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx3P50481 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx3P50481 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx3P50481 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Lhx3P50481 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Lhx3P50481 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lhx3P50481 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx3P50481 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx3P50481 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx3P50481 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.66□□□□□ -0.38
Lhx3P50481 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx3P50481 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lhx3P50481 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.66□□□□□ -0.38
Lhx3P50481 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx3P50481 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lhx3P50481 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Lhx3P50481 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.66□□□□□ -0.38
Lhx3P50481 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lhx3P50481 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.65□□□□□ -0.38
Lhx3P50481 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.65□□□□□ -0.38
Lhx3P50481 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.65□□□□□ -0.38
Lhx3P50481 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.65□□□□□ -0.38
Lhx3P50481 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lhx3P50481 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.65□□□□□ -0.38
Lhx3P50481 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.65□□□□□ -0.38
Lhx3P50481 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Lhx3P50481 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.65□□□□□ -0.38
Lhx3P50481 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.65□□□□□ -0.38
Lhx3P50481 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Lhx3P50481 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.65□□□□□ -0.38
Lhx3P50481 Gm13097-201ENSMUST00000210722 397 ntBASIC12.65□□□□□ -0.38
Lhx3P50481 Gm19994-201ENSMUST00000217086 586 ntBASIC12.65□□□□□ -0.38
Lhx3P50481 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.65□□□□□ -0.38
Lhx3P50481 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.65□□□□□ -0.38
Lhx3P50481 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.65□□□□□ -0.38
Lhx3P50481 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.65□□□□□ -0.38
Lhx3P50481 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.65□□□□□ -0.38
Lhx3P50481 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lhx3P50481 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.65□□□□□ -0.39
Lhx3P50481 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.64□□□□□ -0.39
Lhx3P50481 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Gm24830-201ENSMUST00000102024 166 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lhx3P50481 Gm12015-201ENSMUST00000117065 843 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Gm25890-201ENSMUST00000177643 165 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm22614-201ENSMUST00000178300 165 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm38241-201ENSMUST00000192641 898 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lhx3P50481 Gm9996-201ENSMUST00000070359 913 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm22042-201ENSMUST00000082989 165 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm26232-201ENSMUST00000083360 166 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Gm26110-201ENSMUST00000083971 165 ntBASIC12.64□□□□□ -0.39
Lhx3P50481 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx3P50481 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.64□□□□□ -0.39
Lhx3P50481 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lhx3P50481 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms