Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm22189-201ENSMUST00000103822 86 ntBASIC10.37□□□□□ -0.75
Nkx2-1P50220 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm5354-201ENSMUST00000182417 973 ntBASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm19220-201ENSMUST00000222682 803 ntBASIC10.37□□□□□ -0.75
Nkx2-1P50220 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.37□□□□□ -0.75
Nkx2-1P50220 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx2-1P50220 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.36□□□□□ -0.75
Nkx2-1P50220 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.36□□□□□ -0.75
Nkx2-1P50220 Gm35960-201ENSMUST00000202712 767 ntBASIC10.36□□□□□ -0.75
Nkx2-1P50220 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-1P50220 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.35□□□□□ -0.75
Nkx2-1P50220 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.35□□□□□ -0.75
Nkx2-1P50220 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Gm16202-201ENSMUST00000117532 544 ntBASIC10.35□□□□□ -0.75
Nkx2-1P50220 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Gm12291-201ENSMUST00000121627 311 ntBASIC10.35□□□□□ -0.75
Nkx2-1P50220 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-1P50220 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms