Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.08□□□□□ -0.48
Tnfsf4P43488 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfsf4P43488 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Gm24231-201ENSMUST00000104315 133 ntBASIC12.07□□□□□ -0.48
Tnfsf4P43488 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Gm12384-201ENSMUST00000119228 919 ntBASIC12.07□□□□□ -0.48
Tnfsf4P43488 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Gm6244-201ENSMUST00000178732 841 ntBASIC12.07□□□□□ -0.48
Tnfsf4P43488 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.07□□□□□ -0.48
Tnfsf4P43488 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Gm27331-201ENSMUST00000183705 60 ntBASIC12.07□□□□□ -0.48
Tnfsf4P43488 Gm4768-201ENSMUST00000206199 686 ntBASIC12.07□□□□□ -0.48
Tnfsf4P43488 Gm32025-201ENSMUST00000217960 307 ntBASIC12.07□□□□□ -0.48
Tnfsf4P43488 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Gm8227-201ENSMUST00000223306 571 ntBASIC12.07□□□□□ -0.48
Tnfsf4P43488 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.07□□□□□ -0.48
Tnfsf4P43488 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfsf4P43488 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Cog3-203ENSMUST00000227473 4197 ntBASIC12.06□□□□□ -0.48
Tnfsf4P43488 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.06□□□□□ -0.48
Tnfsf4P43488 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Gm24196-201ENSMUST00000179161 110 ntBASIC12.06□□□□□ -0.48
Tnfsf4P43488 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.06□□□□□ -0.48
Tnfsf4P43488 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Gm19163-201ENSMUST00000223313 780 ntBASIC12.06□□□□□ -0.48
Tnfsf4P43488 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Gm5356-201ENSMUST00000093326 615 ntBASIC12.06□□□□□ -0.48
Tnfsf4P43488 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf4P43488 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms