Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Gm38114-201ENSMUST00000191877 1232 ntBASIC8.42□□□□□ -1.06
Rpl28P41105 Gm37917-201ENSMUST00000194711 392 ntBASIC8.42□□□□□ -1.06
Rpl28P41105 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC8.42□□□□□ -1.06
Rpl28P41105 Gm6218-201ENSMUST00000219812 628 ntBASIC8.42□□□□□ -1.06
Rpl28P41105 Gm8227-201ENSMUST00000223306 571 ntBASIC8.42□□□□□ -1.06
Rpl28P41105 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rpl28P41105 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rpl28P41105 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC8.42□□□□□ -1.06
Rpl28P41105 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Gm21038-201ENSMUST00000222205 1383 ntBASIC8.42□□□□□ -1.06
Rpl28P41105 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rpl28P41105 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Rpl28P41105 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Gm15222-202ENSMUST00000228667 1726 ntBASIC8.42□□□□□ -1.06
Rpl28P41105 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Rpl28P41105 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC8.42□□□□□ -1.06
Rpl28P41105 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC8.42□□□□□ -1.06
Rpl28P41105 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC8.42□□□□□ -1.06
Rpl28P41105 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rpl28P41105 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rpl28P41105 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl28P41105 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
Rpl28P41105 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Gm10110-202ENSMUST00000228705 3220 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC8.41□□□□□ -1.06
Rpl28P41105 Gm8617-201ENSMUST00000118796 2222 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Gm44094-201ENSMUST00000204703 2030 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rpl28P41105 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Rpl28P41105 Gm5638-201ENSMUST00000118618 1258 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Gm12537-201ENSMUST00000119266 1002 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Gm12070-201ENSMUST00000119551 1002 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Gm12671-201ENSMUST00000119978 1002 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Gm13292-201ENSMUST00000120014 1000 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Rpl28P41105 Gm12403-201ENSMUST00000121384 959 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC8.41□□□□□ -1.06
Rpl28P41105 Gm10359-201ENSMUST00000180167 1002 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Gm12033-201ENSMUST00000180654 1002 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Gm5559-201ENSMUST00000180755 1002 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Gm4335-201ENSMUST00000182581 1004 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC8.41□□□□□ -1.06
Rpl28P41105 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC8.41□□□□□ -1.06
Rpl28P41105 AC073947.2-201ENSMUST00000215888 1130 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 AC155286.1-201ENSMUST00000218632 448 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 AC154276.1-201ENSMUST00000228874 1299 ntBASIC8.41□□□□□ -1.06
Rpl28P41105 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC8.41□□□□□ -1.06
Rpl28P41105 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC8.41□□□□□ -1.06
Rpl28P41105 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl28P41105 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rpl28P41105 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Rpl28P41105 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rpl28P41105 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms