Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox6P40645 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.78□□□□□ -0.52
Sox6P40645 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox6P40645 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sox6P40645 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sox6P40645 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Sox6P40645 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox6P40645 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox6P40645 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox6P40645 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sox6P40645 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sox6P40645 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox6P40645 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.77□□□□□ -0.53
Sox6P40645 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Gm11618-201ENSMUST00000117946 267 ntBASIC11.77□□□□□ -0.53
Sox6P40645 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Gm8652-201ENSMUST00000181363 964 ntBASIC11.77□□□□□ -0.53
Sox6P40645 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.77□□□□□ -0.53
Sox6P40645 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox6P40645 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox6P40645 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox6P40645 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Sox6P40645 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sox6P40645 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Sox6P40645 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox6P40645 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.76□□□□□ -0.53
Sox6P40645 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.76□□□□□ -0.53
Sox6P40645 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox6P40645 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sox6P40645 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox6P40645 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.76□□□□□ -0.53
Sox6P40645 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox6P40645 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.76□□□□□ -0.53
Sox6P40645 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox6P40645 Proscos-202ENSMUST00000178990 666 ntBASIC11.76□□□□□ -0.53
Sox6P40645 Gm27847-201ENSMUST00000183711 107 ntBASIC11.76□□□□□ -0.53
Sox6P40645 Gm27375-201ENSMUST00000183799 107 ntBASIC11.76□□□□□ -0.53
Sox6P40645 Gm8602-201ENSMUST00000184045 607 ntBASIC11.76□□□□□ -0.53
Sox6P40645 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox6P40645 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.76□□□□□ -0.53
Sox6P40645 Gm8598-201ENSMUST00000221184 836 ntBASIC11.76□□□□□ -0.53
Sox6P40645 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.76□□□□□ -0.53
Sox6P40645 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Sox6P40645 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sox6P40645 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox6P40645 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox6P40645 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.76□□□□□ -0.53
Sox6P40645 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox6P40645 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox6P40645 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.75□□□□□ -0.53
Sox6P40645 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox6P40645 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms