Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.12□□□□□ -0.47
TfamP40630 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.12□□□□□ -0.47
TfamP40630 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Gm12490-201ENSMUST00000120255 560 ntBASIC12.12□□□□□ -0.47
TfamP40630 Gm12363-201ENSMUST00000122250 668 ntBASIC12.12□□□□□ -0.47
TfamP40630 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Gm16296-201ENSMUST00000159905 325 ntBASIC12.12□□□□□ -0.47
TfamP40630 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Gm27847-201ENSMUST00000183711 107 ntBASIC12.12□□□□□ -0.47
TfamP40630 Gm27375-201ENSMUST00000183799 107 ntBASIC12.12□□□□□ -0.47
TfamP40630 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.12□□□□□ -0.47
TfamP40630 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.12□□□□□ -0.47
TfamP40630 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TfamP40630 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.12□□□□□ -0.47
TfamP40630 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.12□□□□□ -0.47
TfamP40630 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TfamP40630 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TfamP40630 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.11□□□□□ -0.47
TfamP40630 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.11□□□□□ -0.47
TfamP40630 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TfamP40630 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.11□□□□□ -0.47
TfamP40630 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.11□□□□□ -0.47
TfamP40630 Gm14760-201ENSMUST00000121831 999 ntBASIC12.11□□□□□ -0.47
TfamP40630 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.11□□□□□ -0.47
TfamP40630 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Gm27839-201ENSMUST00000184242 106 ntBASIC12.11□□□□□ -0.47
TfamP40630 Gm32025-201ENSMUST00000217960 307 ntBASIC12.11□□□□□ -0.47
TfamP40630 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TfamP40630 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TfamP40630 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TfamP40630 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.11□□□□□ -0.47
TfamP40630 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TfamP40630 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TfamP40630 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TfamP40630 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.1□□□□□ -0.47
TfamP40630 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TfamP40630 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
TfamP40630 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Gm15703-201ENSMUST00000120250 880 ntBASIC12.1□□□□□ -0.47
TfamP40630 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.1□□□□□ -0.47
TfamP40630 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms