Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.84□□□□□ -0.35
Cxcl12P40224 Gm44980-201ENSMUST00000205826 314 ntBASIC12.84□□□□□ -0.35
Cxcl12P40224 Gm45120-201ENSMUST00000208880 408 ntBASIC12.84□□□□□ -0.35
Cxcl12P40224 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.84□□□□□ -0.35
Cxcl12P40224 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cxcl12P40224 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.84□□□□□ -0.35
Cxcl12P40224 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cxcl12P40224 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Cxcl12P40224 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cxcl12P40224 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cxcl12P40224 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cxcl12P40224 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cxcl12P40224 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Cxcl12P40224 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.83□□□□□ -0.36
Cxcl12P40224 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.83□□□□□ -0.36
Cxcl12P40224 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Mir1956-201ENSMUST00000157748 65 ntBASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm23045-201ENSMUST00000175041 96 ntBASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm5621-201ENSMUST00000187303 640 ntBASIC12.83□□□□□ -0.36
Cxcl12P40224 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm2875-201ENSMUST00000211333 360 ntBASIC12.83□□□□□ -0.36
Cxcl12P40224 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.83□□□□□ -0.36
Cxcl12P40224 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.83□□□□□ -0.36
Cxcl12P40224 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cxcl12P40224 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.83□□□□□ -0.36
Cxcl12P40224 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cxcl12P40224 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.82□□□□□ -0.36
Cxcl12P40224 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cxcl12P40224 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Gm11511-201ENSMUST00000118146 540 ntBASIC12.82□□□□□ -0.36
Cxcl12P40224 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.82□□□□□ -0.36
Cxcl12P40224 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.82□□□□□ -0.36
Cxcl12P40224 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.82□□□□□ -0.36
Cxcl12P40224 Gm17877-201ENSMUST00000192578 814 ntBASIC12.82□□□□□ -0.36
Cxcl12P40224 Gm44329-201ENSMUST00000197469 112 ntBASIC12.82□□□□□ -0.36
Cxcl12P40224 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.82□□□□□ -0.36
Cxcl12P40224 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.82□□□□□ -0.36
Cxcl12P40224 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cxcl12P40224 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cxcl12P40224 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.82□□□□□ -0.36
Cxcl12P40224 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cxcl12P40224 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms