Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm26670-202ENSMUST00000226862 340 ntBASIC18.32■□□□□ 0.52
Chd1P40201 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chd1P40201 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chd1P40201 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.31■□□□□ 0.52
Chd1P40201 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chd1P40201 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Gm12418-201ENSMUST00000118116 942 ntBASIC18.31■□□□□ 0.52
Chd1P40201 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC18.31■□□□□ 0.52
Chd1P40201 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC18.31■□□□□ 0.52
Chd1P40201 Gm45481-201ENSMUST00000209717 877 ntBASIC18.31■□□□□ 0.52
Chd1P40201 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Rps3a2-201ENSMUST00000074245 792 ntBASIC18.31■□□□□ 0.52
Chd1P40201 Rps3a3-201ENSMUST00000074680 795 ntBASIC18.31■□□□□ 0.52
Chd1P40201 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chd1P40201 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Gm38344-201ENSMUST00000195306 1353 ntBASIC18.31■□□□□ 0.52
Chd1P40201 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Il17rd-203ENSMUST00000225146 3366 ntBASIC18.31■□□□□ 0.52
Chd1P40201 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1P40201 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Chd1P40201 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Chd1P40201 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Chd1P40201 Gm13171-201ENSMUST00000117233 391 ntBASIC18.3■□□□□ 0.52
Chd1P40201 Gm12337-201ENSMUST00000119634 400 ntBASIC18.3■□□□□ 0.52
Chd1P40201 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC18.3■□□□□ 0.52
Chd1P40201 Gm25677-201ENSMUST00000174983 72 ntBASIC18.3■□□□□ 0.52
Chd1P40201 Gm17796-201ENSMUST00000189015 1213 ntBASIC18.3■□□□□ 0.52
Chd1P40201 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Chd1P40201 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chd1P40201 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chd1P40201 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chd1P40201 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1P40201 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Chd1P40201 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Gm24279-201ENSMUST00000104236 131 ntBASIC18.29■□□□□ 0.52
Chd1P40201 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Gm12389-201ENSMUST00000117696 418 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC18.29■□□□□ 0.52
Chd1P40201 Gm24943-201ENSMUST00000158329 433 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Gm29304-201ENSMUST00000186555 695 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Gm29223-201ENSMUST00000188867 695 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Gm2345-201ENSMUST00000193451 589 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Gm37921-201ENSMUST00000194333 695 ntBASIC18.29■□□□□ 0.52
Chd1P40201 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.29■□□□□ 0.52
Chd1P40201 Gm4930-201ENSMUST00000219926 1087 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Gm9415-201ENSMUST00000200462 1321 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Chd1P40201 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC18.29■□□□□ 0.52
Chd1P40201 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Gm15374-201ENSMUST00000119313 844 ntBASIC18.29■□□□□ 0.52
Chd1P40201 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC18.29■□□□□ 0.52
Chd1P40201 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC18.29■□□□□ 0.52
Chd1P40201 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms