Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LdlrP35951 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LdlrP35951 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.47□□□□□ -0.41
LdlrP35951 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
LdlrP35951 Paupar-201ENSMUST00000194826 3482 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LdlrP35951 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LdlrP35951 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Gm14760-201ENSMUST00000121831 999 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Gm6152-201ENSMUST00000151704 340 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.46□□□□□ -0.41
LdlrP35951 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.46□□□□□ -0.41
LdlrP35951 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 Gm18827-201ENSMUST00000188341 790 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.46□□□□□ -0.41
LdlrP35951 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LdlrP35951 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.46□□□□□ -0.41
LdlrP35951 Gm16372-201ENSMUST00000073088 450 ntBASIC12.46□□□□□ -0.41
LdlrP35951 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.46□□□□□ -0.41
LdlrP35951 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LdlrP35951 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
LdlrP35951 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
LdlrP35951 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LdlrP35951 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
LdlrP35951 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LdlrP35951 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LdlrP35951 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LdlrP35951 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LdlrP35951 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
LdlrP35951 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.45□□□□□ -0.42
LdlrP35951 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LdlrP35951 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.45□□□□□ -0.42
LdlrP35951 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.45□□□□□ -0.42
LdlrP35951 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
LdlrP35951 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LdlrP35951 Gm8598-201ENSMUST00000221184 836 ntBASIC12.45□□□□□ -0.42
LdlrP35951 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.45□□□□□ -0.42
LdlrP35951 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.45□□□□□ -0.42
LdlrP35951 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.45□□□□□ -0.42
LdlrP35951 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LdlrP35951 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LdlrP35951 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LdlrP35951 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.42
LdlrP35951 Gm15236-201ENSMUST00000117309 379 ntBASIC12.44□□□□□ -0.42
LdlrP35951 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Gm14921-201ENSMUST00000118643 908 ntBASIC12.44□□□□□ -0.42
LdlrP35951 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.44□□□□□ -0.42
LdlrP35951 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms