Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Rmrp-201ENSMUST00000157463 271 ntBASIC11.63□□□□□ -0.55
Thbs1P35441 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Thbs1P35441 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.63□□□□□ -0.55
Thbs1P35441 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.63□□□□□ -0.55
Thbs1P35441 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC11.63□□□□□ -0.55
Thbs1P35441 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.63□□□□□ -0.55
Thbs1P35441 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Thbs1P35441 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Thbs1P35441 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.63□□□□□ -0.55
Thbs1P35441 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Thbs1P35441 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.62□□□□□ -0.55
Thbs1P35441 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.62□□□□□ -0.55
Thbs1P35441 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.62□□□□□ -0.55
Thbs1P35441 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.62□□□□□ -0.55
Thbs1P35441 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.62□□□□□ -0.55
Thbs1P35441 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Gm11964-201ENSMUST00000120982 444 ntBASIC11.62□□□□□ -0.55
Thbs1P35441 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Gm1335-201ENSMUST00000121653 386 ntBASIC11.62□□□□□ -0.55
Thbs1P35441 Gm14126-201ENSMUST00000122345 395 ntBASIC11.62□□□□□ -0.55
Thbs1P35441 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC11.62□□□□□ -0.55
Thbs1P35441 Gm21147-201ENSMUST00000186046 913 ntBASIC11.62□□□□□ -0.55
Thbs1P35441 Gm43818-201ENSMUST00000200605 466 ntBASIC11.62□□□□□ -0.55
Thbs1P35441 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.62□□□□□ -0.55
Thbs1P35441 AC154828.2-201ENSMUST00000220908 1070 ntBASIC11.62□□□□□ -0.55
Thbs1P35441 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Thbs1P35441 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Thbs1P35441 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Thbs1P35441 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.62□□□□□ -0.55
Thbs1P35441 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.62□□□□□ -0.55
Thbs1P35441 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thbs1P35441 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.61□□□□□ -0.55
Thbs1P35441 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.61□□□□□ -0.55
Thbs1P35441 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.61□□□□□ -0.55
Thbs1P35441 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.61□□□□□ -0.55
Thbs1P35441 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.61□□□□□ -0.55
Thbs1P35441 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.61□□□□□ -0.55
Thbs1P35441 Mir6420-201ENSMUST00000185032 102 ntBASIC11.61□□□□□ -0.55
Thbs1P35441 Gm38188-201ENSMUST00000192879 856 ntBASIC11.61□□□□□ -0.55
Thbs1P35441 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.61□□□□□ -0.55
Thbs1P35441 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.61□□□□□ -0.55
Thbs1P35441 Gm45331-201ENSMUST00000209868 554 ntBASIC11.61□□□□□ -0.55
Thbs1P35441 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Thbs1P35441 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.61□□□□□ -0.55
Thbs1P35441 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Thbs1P35441 Gm10478-201ENSMUST00000084451 396 ntBASIC11.61□□□□□ -0.55
Thbs1P35441 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.61□□□□□ -0.55
Thbs1P35441 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Thbs1P35441 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.61□□□□□ -0.55
Thbs1P35441 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms