Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm10146-201ENSMUST00000072739 309 ntBASIC12.82□□□□□ -0.36
Mmp13P33435 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Mmp13P33435 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Mmp13P33435 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Mmp13P33435 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp13P33435 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.81□□□□□ -0.36
Mmp13P33435 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Mmp13P33435 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.81□□□□□ -0.36
Mmp13P33435 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Mmp13P33435 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
Mmp13P33435 Gm8805-201ENSMUST00000117848 313 ntBASIC12.81□□□□□ -0.36
Mmp13P33435 Gm13123-201ENSMUST00000122173 492 ntBASIC12.81□□□□□ -0.36
Mmp13P33435 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.81□□□□□ -0.36
Mmp13P33435 Gm43438-201ENSMUST00000198133 379 ntBASIC12.81□□□□□ -0.36
Mmp13P33435 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Mmp13P33435 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.81□□□□□ -0.36
Mmp13P33435 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.81□□□□□ -0.36
Mmp13P33435 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Mmp13P33435 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.81□□□□□ -0.36
Mmp13P33435 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Mmp13P33435 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp13P33435 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Mmp13P33435 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.8□□□□□ -0.36
Mmp13P33435 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.8□□□□□ -0.36
Mmp13P33435 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Gm12957-201ENSMUST00000117835 377 ntBASIC12.8□□□□□ -0.36
Mmp13P33435 Gm1335-201ENSMUST00000121653 386 ntBASIC12.8□□□□□ -0.36
Mmp13P33435 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Mmp13P33435 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.8□□□□□ -0.36
Mmp13P33435 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.8□□□□□ -0.36
Mmp13P33435 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.8□□□□□ -0.36
Mmp13P33435 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.8□□□□□ -0.36
Mmp13P33435 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Mmp13P33435 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Mmp13P33435 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.8□□□□□ -0.36
Mmp13P33435 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp13P33435 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp13P33435 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms