Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nedd8P29595 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nedd8P29595 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nedd8P29595 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nedd8P29595 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nedd8P29595 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.52□□□□□ -0.57
Nedd8P29595 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.52□□□□□ -0.57
Nedd8P29595 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Mir686-201ENSMUST00000102174 109 ntBASIC11.52□□□□□ -0.57
Nedd8P29595 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Gm25287-201ENSMUST00000103846 110 ntBASIC11.52□□□□□ -0.57
Nedd8P29595 Gm22918-201ENSMUST00000103855 110 ntBASIC11.52□□□□□ -0.57
Nedd8P29595 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nedd8P29595 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Nedd8P29595 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.52□□□□□ -0.57
Nedd8P29595 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.52□□□□□ -0.57
Nedd8P29595 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Nedd8P29595 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.52□□□□□ -0.57
Nedd8P29595 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.52□□□□□ -0.57
Nedd8P29595 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.52□□□□□ -0.57
Nedd8P29595 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.52□□□□□ -0.57
Nedd8P29595 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nedd8P29595 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nedd8P29595 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.52□□□□□ -0.57
Nedd8P29595 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nedd8P29595 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Nedd8P29595 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nedd8P29595 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nedd8P29595 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nedd8P29595 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nedd8P29595 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nedd8P29595 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.51□□□□□ -0.57
Nedd8P29595 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.51□□□□□ -0.57
Nedd8P29595 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.51□□□□□ -0.57
Nedd8P29595 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nedd8P29595 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.51□□□□□ -0.57
Nedd8P29595 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nedd8P29595 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nedd8P29595 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Nedd8P29595 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.51□□□□□ -0.57
Nedd8P29595 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nedd8P29595 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.51□□□□□ -0.57
Nedd8P29595 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nedd8P29595 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nedd8P29595 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nedd8P29595 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms