Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
H2afxP27661 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
H2afxP27661 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
H2afxP27661 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
H2afxP27661 Gm15703-201ENSMUST00000120250 880 ntBASIC13.03□□□□□ -0.32
H2afxP27661 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.03□□□□□ -0.32
H2afxP27661 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.03□□□□□ -0.32
H2afxP27661 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.03□□□□□ -0.32
H2afxP27661 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.03□□□□□ -0.32
H2afxP27661 Gm43125-201ENSMUST00000201724 730 ntBASIC13.03□□□□□ -0.32
H2afxP27661 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
H2afxP27661 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.03□□□□□ -0.32
H2afxP27661 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afxP27661 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afxP27661 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
H2afxP27661 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afxP27661 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afxP27661 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afxP27661 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
H2afxP27661 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
H2afxP27661 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.03□□□□□ -0.32
H2afxP27661 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afxP27661 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afxP27661 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afxP27661 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afxP27661 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afxP27661 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afxP27661 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
H2afxP27661 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC13.02□□□□□ -0.32
H2afxP27661 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afxP27661 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afxP27661 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.02□□□□□ -0.32
H2afxP27661 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.02□□□□□ -0.32
H2afxP27661 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
H2afxP27661 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afxP27661 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afxP27661 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
H2afxP27661 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.02□□□□□ -0.33
H2afxP27661 Mir6990-201ENSMUST00000183724 91 ntBASIC13.02□□□□□ -0.33
H2afxP27661 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.02□□□□□ -0.33
H2afxP27661 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
H2afxP27661 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.02□□□□□ -0.33
H2afxP27661 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.02□□□□□ -0.33
H2afxP27661 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.02□□□□□ -0.33
H2afxP27661 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.02□□□□□ -0.33
H2afxP27661 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
H2afxP27661 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.02□□□□□ -0.33
H2afxP27661 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afxP27661 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
H2afxP27661 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H2afxP27661 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
H2afxP27661 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
H2afxP27661 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Gm14921-201ENSMUST00000118643 908 ntBASIC13.01□□□□□ -0.33
H2afxP27661 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Gm27622-201ENSMUST00000183779 60 ntBASIC13.01□□□□□ -0.33
H2afxP27661 Gm27494-201ENSMUST00000184735 189 ntBASIC13.01□□□□□ -0.33
H2afxP27661 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
H2afxP27661 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.01□□□□□ -0.33
H2afxP27661 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H2afxP27661 Gm10175-201ENSMUST00000086013 645 ntBASIC13.01□□□□□ -0.33
H2afxP27661 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afxP27661 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Gm42141-201ENSMUST00000196534 2172 ntBASIC13.01□□□□□ -0.33
H2afxP27661 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afxP27661 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13□□□□□ -0.33
H2afxP27661 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afxP27661 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afxP27661 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afxP27661 Gm43931-201ENSMUST00000204817 2870 ntBASIC13□□□□□ -0.33
H2afxP27661 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13□□□□□ -0.33
H2afxP27661 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms