Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Col8a2P25318 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Col8a2P25318 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.43□□□□□ -0.74
Col8a2P25318 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm24231-201ENSMUST00000104315 133 ntBASIC10.43□□□□□ -0.74
Col8a2P25318 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.43□□□□□ -0.74
Col8a2P25318 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.43□□□□□ -0.74
Col8a2P25318 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.43□□□□□ -0.74
Col8a2P25318 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm45186-201ENSMUST00000206874 478 ntBASIC10.43□□□□□ -0.74
Col8a2P25318 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gzmn-202ENSMUST00000225535 989 ntBASIC10.43□□□□□ -0.74
Col8a2P25318 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.43□□□□□ -0.74
Col8a2P25318 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.43□□□□□ -0.74
Col8a2P25318 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Col8a2P25318 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Col8a2P25318 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Col8a2P25318 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Col8a2P25318 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm24830-201ENSMUST00000102024 166 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm15236-201ENSMUST00000117309 379 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Gm14760-201ENSMUST00000121831 999 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.42□□□□□ -0.74
Col8a2P25318 Rmrp-201ENSMUST00000157463 271 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm25890-201ENSMUST00000177643 165 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Gm22614-201ENSMUST00000178300 165 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm2383-201ENSMUST00000181461 807 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Gm8885-201ENSMUST00000189382 598 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm10076-201ENSMUST00000073238 384 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Gm22042-201ENSMUST00000082989 165 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Gm26232-201ENSMUST00000083360 166 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Gm24136-201ENSMUST00000083374 165 ntBASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms