Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gm43438-201ENSMUST00000198133 379 ntBASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf1aP25118 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm9630-201ENSMUST00000178304 885 ntBASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm6091-201ENSMUST00000098307 165 ntBASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1aP25118 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms