Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
TP20293 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
TP20293 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TP20293 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TP20293 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TP20293 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.81□□□□□ -0.52
TP20293 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
TP20293 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.81□□□□□ -0.52
TP20293 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TP20293 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TP20293 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TP20293 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Gm23363-201ENSMUST00000175024 79 ntBASIC11.81□□□□□ -0.52
TP20293 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
TP20293 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.81□□□□□ -0.52
TP20293 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TP20293 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
TP20293 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.81□□□□□ -0.52
TP20293 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.81□□□□□ -0.52
TP20293 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.81□□□□□ -0.52
TP20293 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TP20293 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.81□□□□□ -0.52
TP20293 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TP20293 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.8□□□□□ -0.52
TP20293 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TP20293 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.8□□□□□ -0.52
TP20293 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TP20293 Gm14127-201ENSMUST00000117906 678 ntBASIC11.8□□□□□ -0.52
TP20293 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TP20293 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TP20293 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.8□□□□□ -0.52
TP20293 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.8□□□□□ -0.52
TP20293 AY702102-202ENSMUST00000194651 1173 ntBASIC11.8□□□□□ -0.52
TP20293 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.8□□□□□ -0.52
TP20293 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.8□□□□□ -0.52
TP20293 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.8□□□□□ -0.52
TP20293 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.8□□□□□ -0.52
TP20293 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Mir339-201ENSMUST00000083659 96 ntBASIC11.8□□□□□ -0.52
TP20293 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TP20293 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TP20293 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
TP20293 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.8□□□□□ -0.52
TP20293 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms