Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx1P13297 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx1P13297 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx1P13297 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Gm24830-201ENSMUST00000102024 166 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm8805-201ENSMUST00000117848 313 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.04□□□□□ -0.48
Msx1P13297 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.04□□□□□ -0.48
Msx1P13297 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.04□□□□□ -0.48
Msx1P13297 Gm24990-201ENSMUST00000157406 323 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm24548-201ENSMUST00000158650 108 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Msx1P13297 Gm25890-201ENSMUST00000177643 165 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm22614-201ENSMUST00000178300 165 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.04□□□□□ -0.48
Msx1P13297 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm6458-201ENSMUST00000211573 635 ntBASIC12.04□□□□□ -0.48
Msx1P13297 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 AC131743.3-201ENSMUST00000222099 662 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm19163-201ENSMUST00000223313 780 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Msx1P13297 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Msx1P13297 Gm22042-201ENSMUST00000082989 165 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm26232-201ENSMUST00000083360 166 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm24136-201ENSMUST00000083374 165 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Gm26110-201ENSMUST00000083971 165 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Msx1P13297 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Msx1P13297 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Msx1P13297 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.04□□□□□ -0.48
Msx1P13297 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx1P13297 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Msx1P13297 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Msx1P13297 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.03□□□□□ -0.48
Msx1P13297 Gm14263-201ENSMUST00000117955 746 ntBASIC12.03□□□□□ -0.48
Msx1P13297 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Msx1P13297 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC12.03□□□□□ -0.48
Msx1P13297 Gm43058-201ENSMUST00000197645 625 ntBASIC12.03□□□□□ -0.48
Msx1P13297 Gm18584-201ENSMUST00000203098 964 ntBASIC12.03□□□□□ -0.48
Msx1P13297 AC153529.1-201ENSMUST00000217818 370 ntBASIC12.03□□□□□ -0.48
Msx1P13297 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msx1P13297 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.03□□□□□ -0.48
Msx1P13297 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msx1P13297 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Msx1P13297 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx1P13297 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Msx1P13297 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms