Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC9.68□□□□□ -0.86
Ccl1P10146 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ccl1P10146 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Ccl1P10146 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Ccl1P10146 Gm15693-201ENSMUST00000120470 637 ntBASIC9.68□□□□□ -0.86
Ccl1P10146 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccl1P10146 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Gm42550-201ENSMUST00000201553 960 ntBASIC9.68□□□□□ -0.86
Ccl1P10146 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Ccl1P10146 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.68□□□□□ -0.86
Ccl1P10146 Gm26315-201ENSMUST00000083890 321 ntBASIC9.68□□□□□ -0.86
Ccl1P10146 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ccl1P10146 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ccl1P10146 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Ccl1P10146 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ccl1P10146 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ccl1P10146 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.68□□□□□ -0.86
Ccl1P10146 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccl1P10146 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.68□□□□□ -0.86
Ccl1P10146 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ccl1P10146 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Ccl1P10146 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.67□□□□□ -0.86
Ccl1P10146 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Ccl1P10146 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.67□□□□□ -0.86
Ccl1P10146 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.67□□□□□ -0.86
Ccl1P10146 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccl1P10146 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Ccl1P10146 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.67□□□□□ -0.86
Ccl1P10146 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccl1P10146 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccl1P10146 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Gm25144-201ENSMUST00000179561 110 ntBASIC9.67□□□□□ -0.86
Ccl1P10146 Gm25352-201ENSMUST00000179815 110 ntBASIC9.67□□□□□ -0.86
Ccl1P10146 Gm42599-201ENSMUST00000201308 469 ntBASIC9.67□□□□□ -0.86
Ccl1P10146 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccl1P10146 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ccl1P10146 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Ccl1P10146 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Ccl1P10146 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccl1P10146 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.67□□□□□ -0.86
Ccl1P10146 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ccl1P10146 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.66□□□□□ -0.86
Ccl1P10146 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl1P10146 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl1P10146 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ccl1P10146 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ccl1P10146 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Ccl1P10146 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms