Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.27□□□□□ -0.29
TnfP06804 Gm14644-201ENSMUST00000116671 647 ntBASIC13.27□□□□□ -0.29
TnfP06804 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.27□□□□□ -0.29
TnfP06804 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TnfP06804 Gm32999-201ENSMUST00000192693 562 ntBASIC13.27□□□□□ -0.29
TnfP06804 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.27□□□□□ -0.29
TnfP06804 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TnfP06804 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.27□□□□□ -0.29
TnfP06804 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.27□□□□□ -0.29
TnfP06804 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.27□□□□□ -0.29
TnfP06804 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TnfP06804 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.27□□□□□ -0.29
TnfP06804 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TnfP06804 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
TnfP06804 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TnfP06804 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
TnfP06804 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Gm13996-201ENSMUST00000118456 430 ntBASIC13.26□□□□□ -0.29
TnfP06804 Gm11439-201ENSMUST00000118598 409 ntBASIC13.26□□□□□ -0.29
TnfP06804 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Gm14277-201ENSMUST00000121195 360 ntBASIC13.26□□□□□ -0.29
TnfP06804 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TnfP06804 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TnfP06804 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Gm18827-201ENSMUST00000188341 790 ntBASIC13.26□□□□□ -0.29
TnfP06804 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.26□□□□□ -0.29
TnfP06804 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TnfP06804 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.26□□□□□ -0.29
TnfP06804 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.26□□□□□ -0.29
TnfP06804 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.26□□□□□ -0.29
TnfP06804 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.26□□□□□ -0.29
TnfP06804 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Gm9996-201ENSMUST00000070359 913 ntBASIC13.26□□□□□ -0.29
TnfP06804 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TnfP06804 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TnfP06804 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.25□□□□□ -0.29
TnfP06804 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.25□□□□□ -0.29
TnfP06804 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.25□□□□□ -0.29
TnfP06804 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TnfP06804 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.25□□□□□ -0.29
TnfP06804 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Gm14208-201ENSMUST00000119645 678 ntBASIC13.25□□□□□ -0.29
TnfP06804 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.25□□□□□ -0.29
TnfP06804 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Gm23119-201ENSMUST00000158610 140 ntBASIC13.25□□□□□ -0.29
TnfP06804 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TnfP06804 Gm27341-201ENSMUST00000183570 106 ntBASIC13.25□□□□□ -0.29
TnfP06804 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.25□□□□□ -0.29
TnfP06804 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.25□□□□□ -0.29
TnfP06804 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.25□□□□□ -0.29
TnfP06804 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
TnfP06804 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
TnfP06804 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TnfP06804 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TnfP06804 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 483.4 ms