Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Krt1P04104 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Krt1P04104 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Krt1P04104 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt1P04104 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Krt1P04104 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Krt1P04104 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.8□□□□□ -0.52
Krt1P04104 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.8□□□□□ -0.52
Krt1P04104 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.8□□□□□ -0.52
Krt1P04104 Gm10253-201ENSMUST00000194270 940 ntBASIC11.8□□□□□ -0.52
Krt1P04104 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.8□□□□□ -0.52
Krt1P04104 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.8□□□□□ -0.52
Krt1P04104 Gm26315-201ENSMUST00000083890 321 ntBASIC11.8□□□□□ -0.52
Krt1P04104 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Krt1P04104 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Krt1P04104 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Krt1P04104 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt1P04104 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Krt1P04104 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Krt1P04104 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Krt1P04104 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Krt1P04104 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Krt1P04104 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.79□□□□□ -0.52
Krt1P04104 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Krt1P04104 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Krt1P04104 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.79□□□□□ -0.52
Krt1P04104 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.79□□□□□ -0.52
Krt1P04104 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.79□□□□□ -0.52
Krt1P04104 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.79□□□□□ -0.52
Krt1P04104 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Krt1P04104 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.79□□□□□ -0.52
Krt1P04104 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Krt1P04104 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Krt1P04104 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt1P04104 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms