Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
CfdP03953 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.45□□□□□ -0.74
CfdP03953 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CfdP03953 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.45□□□□□ -0.74
CfdP03953 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CfdP03953 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CfdP03953 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.44□□□□□ -0.74
CfdP03953 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.44□□□□□ -0.74
CfdP03953 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.44□□□□□ -0.74
CfdP03953 Gm24513-201ENSMUST00000174964 138 ntBASIC10.44□□□□□ -0.74
CfdP03953 Gm27397-201ENSMUST00000184997 107 ntBASIC10.44□□□□□ -0.74
CfdP03953 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.44□□□□□ -0.74
CfdP03953 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.44□□□□□ -0.74
CfdP03953 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.44□□□□□ -0.74
CfdP03953 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
CfdP03953 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.44□□□□□ -0.74
CfdP03953 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CfdP03953 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
CfdP03953 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
CfdP03953 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.43□□□□□ -0.74
CfdP03953 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CfdP03953 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
CfdP03953 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CfdP03953 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
CfdP03953 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.43□□□□□ -0.74
CfdP03953 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.43□□□□□ -0.74
CfdP03953 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CfdP03953 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.43□□□□□ -0.74
CfdP03953 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.43□□□□□ -0.74
CfdP03953 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.43□□□□□ -0.74
CfdP03953 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.43□□□□□ -0.74
CfdP03953 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CfdP03953 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.43□□□□□ -0.74
CfdP03953 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.43□□□□□ -0.74
CfdP03953 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CfdP03953 Itm2b-204ENSMUST00000228637 783 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms