Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
H3f3cP02301 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
H3f3cP02301 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.77□□□□□ -0.68
H3f3cP02301 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
H3f3cP02301 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
H3f3cP02301 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
H3f3cP02301 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
H3f3cP02301 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
H3f3cP02301 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.77□□□□□ -0.68
H3f3cP02301 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
H3f3cP02301 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
H3f3cP02301 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
H3f3cP02301 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.77□□□□□ -0.69
H3f3cP02301 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm22018-201ENSMUST00000104357 131 ntBASIC10.77□□□□□ -0.69
H3f3cP02301 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.77□□□□□ -0.69
H3f3cP02301 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm12742-201ENSMUST00000117326 410 ntBASIC10.77□□□□□ -0.69
H3f3cP02301 Gm12957-201ENSMUST00000117835 377 ntBASIC10.77□□□□□ -0.69
H3f3cP02301 Gm13492-201ENSMUST00000119772 665 ntBASIC10.77□□□□□ -0.69
H3f3cP02301 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.77□□□□□ -0.69
H3f3cP02301 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.77□□□□□ -0.69
H3f3cP02301 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
H3f3cP02301 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm3890-201ENSMUST00000182416 207 ntBASIC10.77□□□□□ -0.69
H3f3cP02301 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm19184-201ENSMUST00000196798 928 ntBASIC10.77□□□□□ -0.69
H3f3cP02301 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.77□□□□□ -0.69
H3f3cP02301 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.77□□□□□ -0.69
H3f3cP02301 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.77□□□□□ -0.69
H3f3cP02301 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.77□□□□□ -0.69
H3f3cP02301 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
H3f3cP02301 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
H3f3cP02301 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.77□□□□□ -0.69
H3f3cP02301 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
H3f3cP02301 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
H3f3cP02301 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
H3f3cP02301 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
H3f3cP02301 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H3f3cP02301 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.76□□□□□ -0.69
H3f3cP02301 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.76□□□□□ -0.69
H3f3cP02301 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.76□□□□□ -0.69
H3f3cP02301 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 Gm37008-201ENSMUST00000195712 319 ntBASIC10.76□□□□□ -0.69
H3f3cP02301 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.76□□□□□ -0.69
H3f3cP02301 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 Gm5781-201ENSMUST00000219792 443 ntBASIC10.76□□□□□ -0.69
H3f3cP02301 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.76□□□□□ -0.69
H3f3cP02301 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
H3f3cP02301 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Matn2-203ENSMUST00000226766 3252 ntBASIC10.76□□□□□ -0.69
H3f3cP02301 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms