Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.54□□□□□ -0.24
Vti1aO89116 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vti1aO89116 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Vti1aO89116 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Daam2-202ENSMUST00000224595 1926 ntBASIC13.53□□□□□ -0.24
Vti1aO89116 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.53□□□□□ -0.24
Vti1aO89116 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vti1aO89116 Gm27341-201ENSMUST00000183570 106 ntBASIC13.53□□□□□ -0.24
Vti1aO89116 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.53□□□□□ -0.24
Vti1aO89116 Gm38317-201ENSMUST00000195564 343 ntBASIC13.53□□□□□ -0.24
Vti1aO89116 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.53□□□□□ -0.24
Vti1aO89116 Gm45186-201ENSMUST00000206874 478 ntBASIC13.53□□□□□ -0.24
Vti1aO89116 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.53□□□□□ -0.24
Vti1aO89116 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Vti1aO89116 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.53□□□□□ -0.24
Vti1aO89116 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.53□□□□□ -0.24
Vti1aO89116 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vti1aO89116 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Vti1aO89116 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.52□□□□□ -0.24
Vti1aO89116 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vti1aO89116 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vti1aO89116 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vti1aO89116 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vti1aO89116 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Vti1aO89116 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vti1aO89116 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Vti1aO89116 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vti1aO89116 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.52□□□□□ -0.25
Vti1aO89116 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vti1aO89116 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.52□□□□□ -0.25
Vti1aO89116 Nsd1-205ENSMUST00000224693 852 ntBASIC13.52□□□□□ -0.25
Vti1aO89116 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vti1aO89116 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.52□□□□□ -0.25
Vti1aO89116 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.52□□□□□ -0.25
Vti1aO89116 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Vti1aO89116 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.52□□□□□ -0.25
Vti1aO89116 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.52□□□□□ -0.25
Vti1aO89116 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.52□□□□□ -0.25
Vti1aO89116 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vti1aO89116 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Vti1aO89116 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vti1aO89116 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vti1aO89116 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.51□□□□□ -0.25
Vti1aO89116 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.51□□□□□ -0.25
Vti1aO89116 Mir3547-201ENSMUST00000175461 88 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Vti1aO89116 Gm3096-201ENSMUST00000185770 364 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Gm44405-201ENSMUST00000198952 126 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Gm45925-201ENSMUST00000218882 744 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Vti1aO89116 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vti1aO89116 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms