Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.93■□□□□ 0.14
Ubr1O70481 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ubr1O70481 Gm23771-201ENSMUST00000178702 110 ntBASIC15.93■□□□□ 0.14
Ubr1O70481 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ubr1O70481 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ubr1O70481 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ubr1O70481 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Ubr1O70481 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.93■□□□□ 0.14
Ubr1O70481 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ubr1O70481 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC15.92■□□□□ 0.14
Ubr1O70481 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ubr1O70481 Gm45113-201ENSMUST00000207518 165 ntBASIC15.92■□□□□ 0.14
Ubr1O70481 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.92■□□□□ 0.14
Ubr1O70481 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.92■□□□□ 0.14
Ubr1O70481 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Ubr1O70481 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.92■□□□□ 0.14
Ubr1O70481 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.92■□□□□ 0.14
Ubr1O70481 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.92■□□□□ 0.14
Ubr1O70481 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.92■□□□□ 0.14
Ubr1O70481 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.92■□□□□ 0.14
Ubr1O70481 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.92■□□□□ 0.14
Ubr1O70481 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.92■□□□□ 0.14
Ubr1O70481 AC134860.1-201ENSMUST00000224867 660 ntBASIC15.92■□□□□ 0.14
Ubr1O70481 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ubr1O70481 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ubr1O70481 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.92■□□□□ 0.14
Ubr1O70481 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ubr1O70481 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ubr1O70481 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ubr1O70481 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Ubr1O70481 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.91■□□□□ 0.14
Ubr1O70481 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.91■□□□□ 0.14
Ubr1O70481 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.91■□□□□ 0.14
Ubr1O70481 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.91■□□□□ 0.14
Ubr1O70481 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.91■□□□□ 0.14
Ubr1O70481 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.91■□□□□ 0.14
Ubr1O70481 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.91■□□□□ 0.14
Ubr1O70481 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.91■□□□□ 0.14
Ubr1O70481 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ubr1O70481 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ubr1O70481 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubr1O70481 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubr1O70481 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ubr1O70481 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubr1O70481 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ubr1O70481 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.9■□□□□ 0.14
Ubr1O70481 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ubr1O70481 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Ubr1O70481 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Ubr1O70481 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC15.9■□□□□ 0.14
Ubr1O70481 Gm9132-201ENSMUST00000210182 832 ntBASIC15.9■□□□□ 0.14
Ubr1O70481 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms