Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.75□□□□□ -0.21
Trdmt1O55055 Gm10051-201ENSMUST00000145209 414 ntBASIC13.75□□□□□ -0.21
Trdmt1O55055 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.75□□□□□ -0.21
Trdmt1O55055 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.75□□□□□ -0.21
Trdmt1O55055 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.75□□□□□ -0.21
Trdmt1O55055 Gm4482-201ENSMUST00000200876 742 ntBASIC13.75□□□□□ -0.21
Trdmt1O55055 Gm44126-201ENSMUST00000204831 514 ntBASIC13.75□□□□□ -0.21
Trdmt1O55055 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.75□□□□□ -0.21
Trdmt1O55055 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.75□□□□□ -0.21
Trdmt1O55055 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.75□□□□□ -0.21
Trdmt1O55055 Gm1821-202ENSMUST00000227415 750 ntBASIC13.75□□□□□ -0.21
Trdmt1O55055 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.75□□□□□ -0.21
Trdmt1O55055 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.75□□□□□ -0.21
Trdmt1O55055 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trdmt1O55055 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.75□□□□□ -0.21
Trdmt1O55055 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trdmt1O55055 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trdmt1O55055 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm19459-201ENSMUST00000176240 835 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm5733-201ENSMUST00000190232 939 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm37246-201ENSMUST00000192665 835 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Trdmt1O55055 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm26448-201ENSMUST00000082446 203 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.74□□□□□ -0.21
Trdmt1O55055 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trdmt1O55055 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trdmt1O55055 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trdmt1O55055 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.73□□□□□ -0.21
Trdmt1O55055 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trdmt1O55055 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trdmt1O55055 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.73□□□□□ -0.21
Trdmt1O55055 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trdmt1O55055 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gm807-202ENSMUST00000224929 408 ntBASIC13.73□□□□□ -0.21
Trdmt1O55055 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms