Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.87□□□□□ -0.03
Smarce1O54941 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.87□□□□□ -0.03
Smarce1O54941 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarce1O54941 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarce1O54941 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.86□□□□□ -0.03
Smarce1O54941 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Gm11814-201ENSMUST00000119515 929 ntBASIC14.86□□□□□ -0.03
Smarce1O54941 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Smarce1O54941 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.86□□□□□ -0.03
Smarce1O54941 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarce1O54941 Gm9908-201ENSMUST00000211534 448 ntBASIC14.86□□□□□ -0.03
Smarce1O54941 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Smarce1O54941 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smarce1O54941 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarce1O54941 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Smarce1O54941 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smarce1O54941 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smarce1O54941 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.85□□□□□ -0.03
Smarce1O54941 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Smarce1O54941 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.85□□□□□ -0.03
Smarce1O54941 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarce1O54941 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.85□□□□□ -0.03
Smarce1O54941 Gm32025-201ENSMUST00000217960 307 ntBASIC14.85□□□□□ -0.03
Smarce1O54941 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.85□□□□□ -0.03
Smarce1O54941 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarce1O54941 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smarce1O54941 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarce1O54941 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarce1O54941 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarce1O54941 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smarce1O54941 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.84□□□□□ -0.03
Smarce1O54941 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarce1O54941 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Gm4271-201ENSMUST00000174444 973 ntBASIC14.84□□□□□ -0.03
Smarce1O54941 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.84□□□□□ -0.03
Smarce1O54941 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms