Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Npc1O35604 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Npc1O35604 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.23□□□□□ -0.45
Npc1O35604 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Gm13316-201ENSMUST00000140537 691 ntBASIC12.23□□□□□ -0.45
Npc1O35604 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Npc1O35604 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.23□□□□□ -0.45
Npc1O35604 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.23□□□□□ -0.45
Npc1O35604 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Gm45865-201ENSMUST00000211815 945 ntBASIC12.23□□□□□ -0.45
Npc1O35604 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.23□□□□□ -0.45
Npc1O35604 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Npc1O35604 Cts7-204ENSMUST00000225321 1257 ntBASIC12.23□□□□□ -0.45
Npc1O35604 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.23□□□□□ -0.45
Npc1O35604 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Npc1O35604 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Npc1O35604 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.23□□□□□ -0.45
Npc1O35604 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Npc1O35604 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.23□□□□□ -0.45
Npc1O35604 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Npc1O35604 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Daam2-202ENSMUST00000224595 1926 ntBASIC12.23□□□□□ -0.45
Npc1O35604 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npc1O35604 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Npc1O35604 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.22□□□□□ -0.45
Npc1O35604 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Npc1O35604 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.22□□□□□ -0.45
Npc1O35604 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Npc1O35604 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Npc1O35604 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.22□□□□□ -0.45
Npc1O35604 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.22□□□□□ -0.45
Npc1O35604 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Npc1O35604 Gm12058-201ENSMUST00000118614 437 ntBASIC12.22□□□□□ -0.45
Npc1O35604 Gm2991-201ENSMUST00000173338 480 ntBASIC12.22□□□□□ -0.45
Npc1O35604 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Npc1O35604 Gm26956-201ENSMUST00000182176 986 ntBASIC12.22□□□□□ -0.45
Npc1O35604 Gm6621-201ENSMUST00000193251 772 ntBASIC12.22□□□□□ -0.45
Npc1O35604 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Npc1O35604 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Npc1O35604 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npc1O35604 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Npc1O35604 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.22□□□□□ -0.45
Npc1O35604 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.21□□□□□ -0.45
Npc1O35604 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Npc1O35604 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Gm14381-201ENSMUST00000122105 414 ntBASIC12.21□□□□□ -0.45
Npc1O35604 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Npc1O35604 Gm16296-201ENSMUST00000159905 325 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms