Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm14704-201ENSMUST00000120300 874 ntBASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Mir6956-201ENSMUST00000183598 62 ntBASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Mir7684-201ENSMUST00000183858 60 ntBASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm10576-201ENSMUST00000191927 825 ntBASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm6218-201ENSMUST00000219812 628 ntBASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa8J3QNX5 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.4□□□□□ -0.59
Shisa8J3QNX5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa8J3QNX5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.4□□□□□ -0.59
Shisa8J3QNX5 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa8J3QNX5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa8J3QNX5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa8J3QNX5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa8J3QNX5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa8J3QNX5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Mir8102-201ENSMUST00000184148 139 ntBASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa8J3QNX5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms