Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm6867-201ENSMUST00000219165 425 ntBASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcf11G3X9Z4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 AC122876.1-201ENSMUST00000217619 825 ntBASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcf11G3X9Z4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Gm11663-201ENSMUST00000117888 290 ntBASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Gm3150-201ENSMUST00000166418 204 ntBASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Gm44270-201ENSMUST00000203084 1234 ntBASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Gm45113-201ENSMUST00000207518 165 ntBASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Gm9129-201ENSMUST00000218173 1689 ntBASIC18.62■□□□□ 0.57
Pcf11G3X9Z4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Gm24891-201ENSMUST00000104391 136 ntBASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Gm43520-201ENSMUST00000197996 164 ntBASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Gm17831-201ENSMUST00000205579 900 ntBASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Gm7395-201ENSMUST00000216059 1045 ntBASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 AC171241.1-201ENSMUST00000228144 1166 ntBASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Gm45779-201ENSMUST00000212189 4064 ntBASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcf11G3X9Z4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Gm12856-201ENSMUST00000119471 1293 ntBASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Gm14460-201ENSMUST00000121511 639 ntBASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Gm6485-201ENSMUST00000160676 439 ntBASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Gm10752-201ENSMUST00000218348 729 ntBASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Gm5537-201ENSMUST00000091117 1252 ntBASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms