Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Gm24136-201ENSMUST00000083374 165 ntBASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh9F8VPK8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm17150-201ENSMUST00000165577 381 ntBASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh9F8VPK8 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Gm13492-201ENSMUST00000119772 665 ntBASIC12.8□□□□□ -0.36
Pcdh9F8VPK8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms