Protein–RNA interactions for Protein: F7BCN0

Gm28048, Predicted gene, 28048 (Fragment), mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28048F7BCN0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.54□□□□□ -0.56
Gm28048F7BCN0 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm28048F7BCN0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Mir8102-201ENSMUST00000184148 139 ntBASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Gm43575-201ENSMUST00000196420 516 ntBASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Gm18307-201ENSMUST00000206864 949 ntBASIC11.53□□□□□ -0.56
Gm28048F7BCN0 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm28048F7BCN0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms