Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Gm19187-201ENSMUST00000206781 892 ntBASIC12.73□□□□□ -0.37
Ccdc149F6V035 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.73□□□□□ -0.37
Ccdc149F6V035 Gm45598-202ENSMUST00000210719 986 ntBASIC12.73□□□□□ -0.37
Ccdc149F6V035 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc149F6V035 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc149F6V035 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.72□□□□□ -0.37
Ccdc149F6V035 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.72□□□□□ -0.37
Ccdc149F6V035 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gm7857-201ENSMUST00000117957 358 ntBASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.72□□□□□ -0.37
Ccdc149F6V035 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.72□□□□□ -0.37
Ccdc149F6V035 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc149F6V035 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc149F6V035 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.71□□□□□ -0.37
Ccdc149F6V035 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Gm14208-201ENSMUST00000119645 678 ntBASIC12.71□□□□□ -0.37
Ccdc149F6V035 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc149F6V035 Mir6927-201ENSMUST00000184494 71 ntBASIC12.71□□□□□ -0.37
Ccdc149F6V035 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms