Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
R3hdm1E9Q9Q2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
R3hdm1E9Q9Q2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
R3hdm1E9Q9Q2 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
R3hdm1E9Q9Q2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
R3hdm1E9Q9Q2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
R3hdm1E9Q9Q2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
R3hdm1E9Q9Q2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
R3hdm1E9Q9Q2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
R3hdm1E9Q9Q2 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm11667-201ENSMUST00000119828 486 ntBASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm14704-201ENSMUST00000120300 874 ntBASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm5070-201ENSMUST00000177599 862 ntBASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm45219-201ENSMUST00000205602 465 ntBASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm7848-201ENSMUST00000210739 718 ntBASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
R3hdm1E9Q9Q2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
R3hdm1E9Q9Q2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
R3hdm1E9Q9Q2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
R3hdm1E9Q9Q2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
R3hdm1E9Q9Q2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.8□□□□□ -0.2
R3hdm1E9Q9Q2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms