Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scaf11E9PZM7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Scaf11E9PZM7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Gm12943-201ENSMUST00000119616 210 ntBASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Gm12030-201ENSMUST00000121917 223 ntBASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Gm25604-201ENSMUST00000158359 133 ntBASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Gm18367-201ENSMUST00000176139 600 ntBASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Gm26989-201ENSMUST00000182608 749 ntBASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 AC122350.1-201ENSMUST00000228135 533 ntBASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scaf11E9PZM7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Gm5385-201ENSMUST00000118988 1559 ntBASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Scaf11E9PZM7 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Gm29499-201ENSMUST00000189151 486 ntBASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Gm28329-201ENSMUST00000191208 689 ntBASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Gm29171-201ENSMUST00000191397 486 ntBASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 AC138604.1-201ENSMUST00000226969 739 ntBASIC17.18■□□□□ 0.34
Scaf11E9PZM7 AC102368.1-201ENSMUST00000227161 892 ntBASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Gm5705-201ENSMUST00000066241 711 ntBASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms