Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Gm9385-201ENSMUST00000117563 472 ntBASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Gm37714-201ENSMUST00000194742 342 ntBASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-2D3Z4R4 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm24589-201ENSMUST00000116692 94 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm29310-201ENSMUST00000185468 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21825-201ENSMUST00000185728 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm29109-201ENSMUST00000185895 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21896-201ENSMUST00000186520 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21873-201ENSMUST00000186728 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21794-201ENSMUST00000187056 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21880-201ENSMUST00000187275 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21826-201ENSMUST00000187451 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21198-201ENSMUST00000188393 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21749-201ENSMUST00000189343 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Ank2-226ENSMUST00000189368 339 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21901-201ENSMUST00000189568 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm29424-201ENSMUST00000189716 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm28599-201ENSMUST00000189838 694 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21867-201ENSMUST00000189917 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm29269-201ENSMUST00000190087 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21722-201ENSMUST00000190153 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm28423-201ENSMUST00000190701 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21899-201ENSMUST00000190745 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21910-201ENSMUST00000191163 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21849-201ENSMUST00000191571 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm28678-201ENSMUST00000191593 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm20910-201ENSMUST00000193268 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm21871-201ENSMUST00000194621 696 ntBASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-2D3Z4R4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-2D3Z4R4 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms