Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm37246-201ENSMUST00000192665 835 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Mir7686-201ENSMUST00000200604 57 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm45550-201ENSMUST00000209380 946 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.23□□□□□ -0.61
Shank1D3YZU1 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.22□□□□□ -0.61
Shank1D3YZU1 Gm9062-201ENSMUST00000117712 727 ntBASIC11.22□□□□□ -0.61
Shank1D3YZU1 Gm12196-201ENSMUST00000120954 262 ntBASIC11.22□□□□□ -0.61
Shank1D3YZU1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.22□□□□□ -0.61
Shank1D3YZU1 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Gm270-201ENSMUST00000223010 976 ntBASIC11.22□□□□□ -0.61
Shank1D3YZU1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.22□□□□□ -0.61
Shank1D3YZU1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.22□□□□□ -0.61
Shank1D3YZU1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shank1D3YZU1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Gm13315-201ENSMUST00000120376 991 ntBASIC11.21□□□□□ -0.61
Shank1D3YZU1 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.21□□□□□ -0.61
Shank1D3YZU1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.21□□□□□ -0.61
Shank1D3YZU1 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Shank1D3YZU1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.21□□□□□ -0.61
Shank1D3YZU1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.21□□□□□ -0.61
Shank1D3YZU1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shank1D3YZU1 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.21□□□□□ -0.62
Shank1D3YZU1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.21□□□□□ -0.62
Shank1D3YZU1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms