Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Gm18935-201ENSMUST00000212692 664 ntBASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pnldc1B2RXZ1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Gm7584-201ENSMUST00000175829 940 ntBASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Gm9368-201ENSMUST00000219348 831 ntBASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pnldc1B2RXZ1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pnldc1B2RXZ1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pnldc1B2RXZ1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms